Gergely J, Szöllősi

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Vincent DaubincnrsVerified email at univ-lyon1.fr
Bastien BoussauLBBE, UMR 5558, CNRS researcher, Université de LyonVerified email at univ-lyon1.fr
Tom A. WilliamsAssociate Professor in Molecular Evolution, University of BristolVerified email at bristol.ac.uk
Eric TannierInria, IXXI, ENS Lyon, Univ LyonVerified email at inria.fr
Adrián A. DavínPostdoctoral fellow at ETH ZürichVerified email at ethz.ch
Imre DerenyiDepartment of Biological Physics, Eotvos University, HungaryVerified email at elte.hu
Anja SpangResearch Leader at Royal Netherlands Institute for Sea Research (NIOZ), MMBVerified email at nioz.nl
Dominik SchrempfDept. Biological Physics, Eötvös Loránd University, Budapest, HungaryVerified email at caesar.elte.hu
Lénárd L. SzánthóOkinawa Institute of Science and Technology, OISTVerified email at oist.jp
Peter G. FosterNatural History Museum, LondonVerified email at nhm.ac.uk
Martin EmbleyProfessor of Molecular Evolution, Newcastle UniversityVerified email at ncl.ac.uk
Celine ScornavaccaInstitut des Sciences de l'Evolution, MontpellierVerified email at umontpellier.fr
Philip HugenholtzAustralian Centre for Ecogenomics, SCMB, The University of QueenslandVerified email at uq.edu.au
Benoit MorelHeidelberg Institute of Theoretical StudiesVerified email at h-its.org
Philip C. J. DonoghueProfessor of Palaeobiology, University of Bristol, School of Earth SciencesVerified email at bristol.ac.uk
Tara A. MahendrarajahRoyal Netherlands Institute for Sea ResearchVerified email at nioz.nl
Manolo GouyLaboratory of Biometry and Evolutionary Biology, CNRS, LyonVerified email at univ-lyon1.fr
Alexandros StamatakisFoundation for Research and Technology - Hellas, HITS gGmbH, KITVerified email at ics.forth.gr
Edmund R. R. MoodyUniversity of BristolVerified email at bristol.ac.uk
James W. ClarkUniversity of BathVerified email at bath.ac.uk

Gergely J, Szöllősi

Other namesGJ, Szöllősi, GJ, Szollosi, Gergely J, Szollosi

Okinawa Institute of Science and Technology, OIST, Eötvös University, ELTE, HUN-REN ÖK ETI

Verified email at oist.jp - Homepage

tree of life somatic evolution evolutionary biology bioinformatics theoretical biology


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Phase transition in the collective migration of tissue cells: experiment and model B Szabo, GJ Szöllösi, B Gönci, Z Jurányi, D Selmeczi, T Vicsek Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 74 (6 …, 2006	607	2006
Damage and fluctuations induce loops in optimal transport networks E Katifori, GJ Szöllősi, MO Magnasco Physical review letters 104 (4), 048704, 2010	415	2010
Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits S Miyauchi, E Kiss, A Kuo, E Drula, A Kohler, M Sánchez-García, E Morin, ... Nature communications 11 (1), 5125, 2020	386	2020
Genome-scale coestimation of species and gene trees B Boussau, GJ Szöllősi, L Duret, M Gouy, E Tannier, V Daubin Genome research 23 (2), 323-330, 2013	315	2013
The inference of gene trees with species trees GJ Szöllősi, E Tannier, V Daubin, B Boussau Systematic biology 64 (1), e42-e62, 2015	294	2015
Megaphylogeny resolves global patterns of mushroom evolution T Varga, K Krizsán, C Földi, B Dima, M Sánchez-García, ... Nature ecology & evolution 3 (4), 668-678, 2019	276	2019
Integrative modeling of gene and genome evolution roots the archaeal tree of life TA Williams, GJ Szöllősi, A Spang, PG Foster, SE Heaps, B Boussau, ... Proceedings of the National Academy of Sciences 114 (23), E4602-E4611, 2017	253	2017
Phylogenomics provides robust support for a two-domains tree of life TA Williams, CJ Cox, PG Foster, GJ Szöllősi, TM Embley Nature ecology & evolution 4 (1), 138-147, 2020	245	2020
Efficient exploration of the space of reconciled gene trees GJ Szöllősi, W Rosikiewicz, B Boussau, E Tannier, V Daubin Systematic biology 62 (6), 901-912, 2013	225	2013
A rooted phylogeny resolves early bacterial evolution GA Coleman, AA Davín, TA Mahendrarajah, LL Szánthó, A Spang, ... Science 372 (6542), eabe0511, 2021	217	2021
Phylogenetic modeling of lateral gene transfer reconstructs the pattern and relative timing of speciations GJ Szöllősi, B Boussau, SS Abby, E Tannier, V Daubin Proceedings of the national academy of sciences 109 (43), 17513-17518, 2012	198	2012
An efficient algorithm for gene/species trees parsimonious reconciliation with losses, duplications and transfers JP Doyon, C Scornavacca, KY Gorbunov, GJ Szöllősi, V Ranwez, V Berry Comparative Genomics: International Workshop, RECOMB-CG 2010, Ottawa, Canada …, 2010	198	2010
Horizontal gene transfer and the history of life V Daubin, GJ Szöllősi Cold Spring Harbor perspectives in biology 8 (4), a018036, 2016	159	2016
GeneRax: a tool for species-tree-aware maximum likelihood-based gene family tree inference under gene duplication, transfer, and loss B Morel, AM Kozlov, A Stamatakis, GJ Szöllősi Molecular biology and evolution 37 (9), 2763-2774, 2020	139	2020
Lateral gene transfer from the dead GJ Szöllősi, E Tannier, N Lartillot, V Daubin Systematic biology 62 (3), 386-397, 2013	136	2013
Emergent neutrality in adaptive asexual evolution S Schiffels, GJ Szöllősi, V Mustonen, M Lässig Genetics 189 (4), 1361-1375, 2011	130	2011
Divergent evolutionary trajectories of bryophytes and tracheophytes from a complex common ancestor of land plants BJ Harris, JW Clark, D Schrempf, GJ Szöllősi, PCJ Donoghue, ... Nature Ecology & Evolution 6 (11), 1634-1643, 2022	123	2022
ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony E Jacox, C Chauve, GJ Szöllősi, Y Ponty, C Scornavacca Bioinformatics 32 (13), 2056-2058, 2016	114	2016
How Long Does Wolbachia Remain on Board? M Bailly-Bechet, P Martins-Simões, GJ Szöllősi, G Mialdea, MF Sagot, ... Molecular Biology and Evolution 34 (5), 1183-1193, 2017	106	2017
Genome-scale phylogenetic analysis finds extensive gene transfer among fungi GJ Szöllősi, AA Davín, E Tannier, V Daubin, B Boussau Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015	104	2015

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