A common mechanism of cellular death induced by bactericidal antibiotics MA Kohanski, DJ Dwyer, B Hayete, CA Lawrence, JJ Collins Cell 130 (5), 797-810, 2007 | 3200 | 2007 |
Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles JJ Faith, B Hayete, JT Thaden, I Mogno, J Wierzbowski, G Cottarel, ... PLoS biology 5 (1), e8, 2007 | 1874 | 2007 |
Gyrase inhibitors induce an oxidative damage cellular death pathway in Escherichia coli DJ Dwyer, MA Kohanski, B Hayete, JJ Collins Molecular systems biology 3 (1), 91, 2007 | 551 | 2007 |
Many Microbe Microarrays Database: uniformly normalized Affymetrix compendia with structured experimental metadata JJ Faith, ME Driscoll, VA Fusaro, EJ Cosgrove, B Hayete, FS Juhn, ... Nucleic acids research 36 (suppl_1), D866-D870, 2007 | 323 | 2007 |
Large-scale identification of clinical and genetic predictors of motor progression in patients with newly diagnosed Parkinson's disease: a longitudinal cohort study and validation JC Latourelle, MT Beste, TC Hadzi, RE Miller, JN Oppenheim, MP Valko, ... The Lancet Neurology 16 (11), 908-916, 2017 | 156 | 2017 |
Gotrees: predicting go associations from protein domain composition using decision trees B Hayete, JR Bienkowska Biocomputing 2005, 127-138, 2005 | 63 | 2005 |
Size matters: network inference tackles the genome scale B Hayete, TS Gardner, JJ Collins Molecular systems biology 3 (1), 77, 2007 | 51 | 2007 |
Multiple Myeloma DREAM Challenge reveals epigenetic regulator PHF19 as marker of aggressive disease MJ Mason, C Schinke, CLP Eng, F Towfic, F Gruber, A Dervan, BS White, ... Leukemia 34 (7), 1866-1874, 2020 | 40 | 2020 |
Systems biology and in vitro validation identifies family with sequence similarity 129 member A (FAM129A) as an asthma steroid response modulator MJ McGeachie, GL Clemmer, B Hayete, H Xing, K Runge, AC Wu, X Jiang, ... Journal of Allergy and Clinical Immunology 142 (5), 1479-1488. e12, 2018 | 16 | 2018 |
A Bayesian mathematical model of motor and cognitive outcomes in Parkinson’s disease B Hayete, D Wuest, J Laramie, P McDonagh, B Church, S Eberly, A Lang, ... PLoS One 12 (6), e0178982, 2017 | 13 | 2017 |
Bayesian network models of multiple myeloma: drivers of high risk and durable response F Gruber, JJ Keats, K McBride, K Runge, D Wuest, T Hadzi, M Derome, ... Blood 128 (22), 4406, 2016 | 7 | 2016 |
Multiple myeloma drivers of high risk and response to stem cell transplantation identified by causal machine learning: out-of-cohort and experimental validation L Furchtgott, A Bolomsky, F Gruber, MK Samur, JJ Keats, J Yesil, ... Blood 130, 3029, 2017 | 6 | 2017 |
Large-scale identification of clinical and genetic predictors of Parkinson’s disease motor progression in newly-diagnosed patients: a longitudinal cohort study and validation JC Latourelle, MT Beste, TC Hadzi, RE Miller, JN Oppenheim, MP Valko, ... The Lancet. Neurology 16 (11), 908, 2017 | 6 | 2017 |
Inferring Gene Networks for Strains of Dehalococcoides Highlights Conserved Relationships between Genes Encoding Core Catabolic and Cell-Wall Structural … CB Mansfeldt, GW Heavner, AR Rowe, B Hayete, BW Church, ... Plos one 11 (11), e0166234, 2016 | 5 | 2016 |
Preclinical validation studies support causal machine learning based identification of novel drug targets for high-risk multiple myeloma A Bolomsky, F Gruber, K Stangelberger, L Furchtgott, D Arnold, P Raut, ... Blood 132, 3210, 2018 | 4 | 2018 |
MDL-motivated compression of GLM ensembles increases interpretability and retains predictive power B Hayete, M Valko, A Greenfield, R Yan arXiv preprint arXiv:1611.06800, 2016 | 4 | 2016 |
Machine learning approach to personalized medicine in breast cancer patients: Development of data-driven, personalized, causal modeling through identification and understanding … H Kaplan, A Berry, K Rinn, E Ellis, G Birchfield, T Wahl, X Liu, M Tameishi, ... Cancer Research 78 (13_Supplement), 5299-5299, 2018 | 3 | 2018 |
Gotrees: Predicting go associations from proteins B Hayete, JR Bienkowska Biocomputing 2005, 127, 2004 | 3 | 2004 |
Causal modeling of CALGB/SWOG 80405 (Alliance) identifies primary (1°) side-related angiogenic drivers of metastatic colorectal cancer (mCRC) RK Das, L Furchtgott, FS Ou, D Swanson, B Hayete, B Harms, D Cunha, ... Annals of Oncology 29, viii152, 2018 | 2 | 2018 |
Method to determine transcriptional regulation pathways in organisms TS Gardner, JJ Collins, B Hayete, J Faith US Patent 8,306,752, 2012 | 2 | 2012 |