| The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update E Afgan, D Baker, B Batut, M Van Den Beek, D Bouvier, M Čech, J Chilton, ... Nucleic acids research 46 (W1), W537-W544, 2018 | 6216 | 2018 |
| Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences J Goecks, A Nekrutenko, J Taylor, TG Team Genome Biol 11 (8), R86, 2010 | 4249 | 2010 |
| Method and system for usage analyzer that determines user accessed sources, indexes data subsets, and associated metadata, processing implicit queries based on potential … ST Dumais, EJ Horvitz, EB Cutrell, JJ Cadiz, G Jancke, RK Sarin, ... US Patent 7,162,473, 2007 | 630 | 2007 |
| The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update V Jalili, E Afgan, Q Gu, D Clements, D Blankenberg, J Goecks, J Taylor, ... Nucleic acids research 48 (W1), W395-W402, 2020 | 458 | 2020 |
| The human tumor atlas network: charting tumor transitions across space and time at single-cell resolution O Rozenblatt-Rosen, A Regev, P Oberdoerffer, T Nawy, A Hupalowska, ... Cell 181 (2), 236-249, 2020 | 421 | 2020 |
| How machine learning will transform biomedicine J Goecks, V Jalili, LM Heiser, JW Gray Cell 181 (1), 92-101, 2020 | 412 | 2020 |
| Learning users' interests by unobtrusively observing their normal behavior J Goecks, J Shavlik Proceedings of the 5th international conference on Intelligent user …, 2000 | 295 | 2000 |
| MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging D Schapiro, A Sokolov, C Yapp, YA Chen, JL Muhlich, J Hess, ... Nature methods 19 (3), 311-315, 2022 | 150 | 2022 |
| Practical computational reproducibility in the life sciences B Grüning, J Chilton, J Köster, R Dale, N Soranzo, M van den Beek, ... Cell systems 6 (6), 631-635, 2018 | 147 | 2018 |
| A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer AH Wagner, B Walsh, G Mayfield, D Tamborero, D Sonkin, K Krysiak, ... Nature genetics 52 (4), 448-457, 2020 | 123 | 2020 |
| Augmenting shared personal calendars J Tullio, J Goecks, ED Mynatt, DH Nguyen Proceedings of the 15th annual ACM symposium on User interface software and …, 2002 | 118 | 2002 |
| Leukocyte heterogeneity in pancreatic ductal adenocarcinoma: phenotypic and spatial features associated with clinical outcome SM Liudahl, CB Betts, S Sivagnanam, V Morales-Oyarvide, A Da Silva, ... Cancer discovery 11 (8), 2014-2031, 2021 | 106 | 2021 |
| Charitable technologies: Opportunities for collaborative computing in nonprofit fundraising J Goecks, A Voida, S Voida, ED Mynatt Proceedings of the 2008 ACM conference on Computer supported cooperative …, 2008 | 103 | 2008 |
| Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space MC Schatz, AA Philippakis, E Afgan, E Banks, VJ Carey, RJ Carroll, ... Cell Genomics 2 (1), 2022 | 101 | 2022 |
| Integrative approach reveals composition of endoparasitoid wasp venoms J Goecks, NT Mortimer, JA Mobley, GJ Bowersock, J Taylor, TA Schlenke PloS one 8 (5), e64125, 2013 | 101 | 2013 |
| Parasitoid wasp venom SERCA regulates Drosophila calcium levels and inhibits cellular immunity NT Mortimer, J Goecks, BZ Kacsoh, JA Mobley, GJ Bowersock, J Taylor, ... Proceedings of the National Academy of Sciences 110 (23), 9427-9432, 2013 | 85 | 2013 |
| High-dimensional multiplexed immunohistochemical characterization of immune contexture in human cancers G Banik, CB Betts, SM Liudahl, S Sivagnanam, R Kawashima, T Cotechini, ... Methods in enzymology 635, 1-20, 2020 | 71 | 2020 |
| T.(2010) Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences J Goecks, A Nekrutenko, J Taylor Genome Biology 11 (8), R86, 0 | 68 | |
| Leveraging social networks for information sharing J Goecks, ED Mynatt Proceedings of the 2004 ACM conference on Computer supported cooperative …, 2004 | 58 | 2004 |
| Web-based visual analysis for high-throughput genomics J Goecks, C Eberhard, T Too, Galaxy Team outreach@ galaxyproject. org, ... BMC genomics 14, 1-11, 2013 | 57 | 2013 |
James TaylorProfessor of Biology and Computer Science, Johns Hopkins UniversityVerified email at jhu.edu
