Thomas Sicheritz-Ponten
Thomas Sicheritz-Ponten
Professor in Computational Biodiscovery, University of Copenhagen
Verified email at sund.ku.dk
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Year
A human gut microbial gene catalogue established by metagenomic sequencing
J Qin, R Li, J Raes, M Arumugam, KS Burgdorf, C Manichanh, T Nielsen, ...
nature 464 (7285), 59-65, 2010
80862010
Enterotypes of the human gut microbiome
M Arumugam, J Raes, E Pelletier, D Le Paslier, T Yamada, DR Mende, ...
nature 473 (7346), 174-180, 2011
49932011
Richness of human gut microbiome correlates with metabolic markers
E Le Chatelier, T Nielsen, J Qin, E Prifti, F Hildebrand, G Falony, ...
Nature 500 (7464), 541-546, 2013
24922013
The genome sequence of Rickettsia prowazekii and the origin of mitochondria
SGE Andersson, A Zomorodipour, JO Andersson, T Sicheritz-PontÚn, ...
Nature 396 (6707), 133-140, 1998
19171998
Prediction of post‐translational glycosylation and phosphorylation of proteins from the amino acid sequence
N Blom, T Sicheritz‐PontÚn, R Gupta, S Gammeltoft, S Brunak
Proteomics 4 (6), 1633-1649, 2004
17632004
Whole-genome analyses resolve early branches in the tree of life of modern birds
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346 (6215), 1320-1331, 2014
12192014
Multilocus sequence typing of total-genome-sequenced bacteria
MV Larsen, S Cosentino, S Rasmussen, C Friis, H Hasman, RL Marvig, ...
Journal of clinical microbiology 50 (4), 1355-1361, 2012
10082012
Population genomics of bronze age Eurasia
ME Allentoft, M Sikora, KG Sj÷gren, S Rasmussen, M Rasmussen, ...
Nature 522 (7555), 167-172, 2015
9442015
The genome of the protist parasite Entamoeba histolytica
B Loftus, I Anderson, R Davies, UCM Alsmark, J Samuelson, P Amedeo, ...
Nature 433 (7028), 865-868, 2005
8642005
Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis
JM Carlton, RP Hirt, JC Silva, AL Delcher, M Schatz, Q Zhao, JR Wortman, ...
Science 315 (5809), 207-212, 2007
8392007
Ancient human genome sequence of an extinct Palaeo-Eskimo
M Rasmussen, Y Li, S Lindgreen, JS Pedersen, A Albrechtsen, I Moltke, ...
Nature 463 (7282), 757-762, 2010
7252010
An Aboriginal Australian genome reveals separate human dispersals into Asia
M Rasmussen, X Guo, Y Wang, KE Lohmueller, S Rasmussen, ...
Science 334 (6052), 94-98, 2011
6612011
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse
L Orlando, A Ginolhac, G Zhang, D Froese, A Albrechtsen, M Stiller, ...
Nature 499 (7456), 74-78, 2013
6202013
Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans
M Raghavan, P Skoglund, KE Graf, M Metspalu, A Albrechtsen, I Moltke, ...
Nature 505 (7481), 87-91, 2014
6052014
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ...
Nature biotechnology 32 (8), 822-828, 2014
5672014
Linear motif atlas for phosphorylation-dependent signaling
ML Miller, LJ Jensen, F Diella, C J°rgensen, M Tinti, L Li, M Hsiung, ...
Science signaling 1 (35), ra2-ra2, 2008
4202008
The genome of a Late Pleistocene human from a Clovis burial site in western Montana
M Rasmussen, SL Anzick, MR Waters, P Skoglund, M DeGiorgio, ...
Nature 506 (7487), 225-229, 2014
4132014
Phospho. ELM: a database of experimentally verified phosphorylation sites in eukaryotic proteins
F Diella, S Cameron, C GemŘnd, R Linding, A Via, B Kuster, ...
BMC bioinformatics 5 (1), 1-5, 2004
3972004
Early divergent strains of Yersinia pestis in Eurasia 5,000 years ago
S Rasmussen, ME Allentoft, K Nielsen, L Orlando, M Sikora, AG Pedersen, ...
Cell 163 (3), 571-582, 2015
2972015
Whole-genome pyrosequencing of an epidemic multidrug-resistant Acinetobacter baumannii strain belonging to the European clone II group
M Iacono, L Villa, D Fortini, R Bordoni, F Imperi, RJP Bonnal, ...
Antimicrobial agents and chemotherapy 52 (7), 2616-2625, 2008
2962008
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