KC Soh
KC Soh
Janssen Human Microbiome Institute
Verified email at
Cited by
Cited by
Towards kinetic modeling of genome‐scale metabolic networks without sacrificing stoichiometric, thermodynamic and physiological constraints
A Chakrabarti, L Miskovic, KC Soh, V Hatzimanikatis
Biotechnology journal 8 (9), 1043-1057, 2013
Manipulating redox and ATP balancing for improved production of succinate in E. coli
A Singh, KC Soh, V Hatzimanikatis, RT Gill
Metabolic engineering 13 (1), 76-81, 2011
Network thermodynamics in the post-genomic era
KC Soh, V Hatzimanikatis
Current opinion in microbiology 13 (3), 350-357, 2010
Identification of metabolic engineering targets for the enhancement of 1,4-butanediol production in recombinant E. coli using large-scale kinetic models
S Andreozzi, A Chakrabarti, KC Soh, A Burgard, TH Yang, S Van Dien, ...
Metabolic engineering 35, 148-159, 2016
From network models to network responses: integration of thermodynamic and kinetic properties of yeast genome‐scale metabolic networks
KC Soh, L Miskovic, V Hatzimanikatis
FEMS yeast research 12 (2), 129-143, 2012
pyTFA and matTFA: a Python package and a Matlab toolbox for Thermodynamics-based Flux Analysis
P Salvy, G Fengos, M Ataman, T Pathier, KC Soh, V Hatzimanikatis
Bioinformatics 35 (1), 167-169, 2018
DREAMS of metabolism
KC Soh, V Hatzimanikatis
Trends in biotechnology 28 (10), 501-508, 2010
Constraining the Flux Space Using Thermodynamics and Integration of Metabolomics Data
KC Soh, V Hatzimanikatis
Metabolic Flux Analysis, 49-63, 2014
A design–build–test cycle using modeling and experiments reveals interdependencies between upper glycolysis and xylose uptake in recombinant S. cerevisiae and improves …
L Miskovic, S Alff-Tuomala, KC Soh, D Barth, L Salusjärvi, JP Pitkänen, ...
Biotechnology for biofuels 10 (1), 166, 2017
A computational framework for integration of lipidomics data into metabolic pathways
N Hadadi, KC Soh, M Seijo, A Zisaki, X Guan, MR Wenk, V Hatzimanikatis
Metabolic engineering 23, 1-8, 2014
Reconstruction of biological pathways and metabolic networks from in silico labeled metabolites
N Hadadi, J Hafner, KC Soh, V Hatzimanikatis
Biotechnology journal 12 (1), 2017
Computational Studies on Cellular Bioenergetics
KC Soh
EPFL, 2013
A novel approach to find the missing links in genome-scale metabolic models: The BridgeIt method
M Seijo, KC Soh, V Hatzimanikatis
Systematic Reduction of Genome Scale Metabolic Reconstructions-redGEM
M Ataman, DF Hernandez Gardiol, G Fengos, KC Soh, V Hatzimanikatis
4th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2015), 2015
Unraveling the inhibitory effects of acetate on ethanol production in CEN. PK
A Chakrabarti, KC Soh, A Kiparissides, H van Rijsewijk, RB Bart, ...
Metabolic Engineering X, 2014
Implications of the Assumptions on Intracellular Metabolic Operational States in Metabolic Control Analysis
G Fengos, A Chakrabarti, KC Soh, L Miskovic, V Hatzimanikatis
Metabolic Engineering X, 2014
Engineering improved productivity of 1, 4-butanediol in E. coli–a kinetic modeling approach
S Andreozzi, A Chakrabarti, KC Soh, A Burgard, S Van Dien, L Miskovic, ...
Metabolic Engineering X, 2014
A Novel Approach to Design of Metabolic Engineering Strategiesa
A Chakrabarti, G Fengos, M Ataman, KC Soh, L Miskovic, ...
Metabolic Engineering X, 2014
Unlocking Yeast Metabolism: Identification of optimal flux directionalities
A Kiparissides, KC Soh, A Chakrabarti, L Miskovic, V Hatzimanikatis
2013 AIChE Annual Meeting, 2013
In silico analysis of the interplay between P/O ratio and physiological states of the optimally grown Escherichia coli
M Ataman, S Andreozzi, KC Soh, L Miskovic
ICSB 2013, 2013
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