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KC Soh
KC Soh
Janssen Human Microbiome Institute
Verified email at its.jnj.com
Title
Cited by
Cited by
Year
Towards kinetic modeling of genome‐scale metabolic networks without sacrificing stoichiometric, thermodynamic and physiological constraints
A Chakrabarti, L Miskovic, KC Soh, V Hatzimanikatis
Biotechnology journal 8 (9), 1043-1057, 2013
1592013
Manipulating redox and ATP balancing for improved production of succinate in E. coli
A Singh, KC Soh, V Hatzimanikatis, RT Gill
Metabolic engineering 13 (1), 76-81, 2011
1252011
Network thermodynamics in the post-genomic era
KC Soh, V Hatzimanikatis
Current opinion in microbiology 13 (3), 350-357, 2010
942010
Identification of metabolic engineering targets for the enhancement of 1,4-butanediol production in recombinant E. coli using large-scale kinetic models
S Andreozzi, A Chakrabarti, KC Soh, A Burgard, TH Yang, S Van Dien, ...
Metabolic engineering 35, 148-159, 2016
792016
From network models to network responses: integration of thermodynamic and kinetic properties of yeast genome‐scale metabolic networks
KC Soh, L Miskovic, V Hatzimanikatis
FEMS yeast research 12 (2), 129-143, 2012
792012
pyTFA and matTFA: a Python package and a Matlab toolbox for Thermodynamics-based Flux Analysis
P Salvy, G Fengos, M Ataman, T Pathier, KC Soh, V Hatzimanikatis
Bioinformatics 35 (1), 167-169, 2018
602018
DREAMS of metabolism
KC Soh, V Hatzimanikatis
Trends in biotechnology 28 (10), 501-508, 2010
562010
Constraining the Flux Space Using Thermodynamics and Integration of Metabolomics Data
KC Soh, V Hatzimanikatis
Metabolic Flux Analysis, 49-63, 2014
512014
A design–build–test cycle using modeling and experiments reveals interdependencies between upper glycolysis and xylose uptake in recombinant S. cerevisiae and improves …
L Miskovic, S Alff-Tuomala, KC Soh, D Barth, L Salusjärvi, JP Pitkänen, ...
Biotechnology for biofuels 10 (1), 166, 2017
302017
A computational framework for integration of lipidomics data into metabolic pathways
N Hadadi, KC Soh, M Seijo, A Zisaki, X Guan, MR Wenk, V Hatzimanikatis
Metabolic engineering 23, 1-8, 2014
202014
Reconstruction of biological pathways and metabolic networks from in silico labeled metabolites
N Hadadi, J Hafner, KC Soh, V Hatzimanikatis
Biotechnology journal 12 (1), 2017
142017
Computational Studies on Cellular Bioenergetics
KC Soh
EPFL, 2013
42013
A novel approach to find the missing links in genome-scale metabolic models: The BridgeIt method
M Seijo, KC Soh, V Hatzimanikatis
22012
Systematic Reduction of Genome Scale Metabolic Reconstructions-redGEM
M Ataman, DF Hernandez Gardiol, G Fengos, KC Soh, V Hatzimanikatis
4th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2015), 2015
2015
Unraveling the inhibitory effects of acetate on ethanol production in CEN. PK
A Chakrabarti, KC Soh, A Kiparissides, H van Rijsewijk, RB Bart, ...
Metabolic Engineering X, 2014
2014
Implications of the Assumptions on Intracellular Metabolic Operational States in Metabolic Control Analysis
G Fengos, A Chakrabarti, KC Soh, L Miskovic, V Hatzimanikatis
Metabolic Engineering X, 2014
2014
Engineering improved productivity of 1, 4-butanediol in E. coli–a kinetic modeling approach
S Andreozzi, A Chakrabarti, KC Soh, A Burgard, S Van Dien, L Miskovic, ...
Metabolic Engineering X, 2014
2014
A Novel Approach to Design of Metabolic Engineering Strategiesa
A Chakrabarti, G Fengos, M Ataman, KC Soh, L Miskovic, ...
Metabolic Engineering X, 2014
2014
Unlocking Yeast Metabolism: Identification of optimal flux directionalities
A Kiparissides, KC Soh, A Chakrabarti, L Miskovic, V Hatzimanikatis
2013 AIChE Annual Meeting, 2013
2013
In silico analysis of the interplay between P/O ratio and physiological states of the optimally grown Escherichia coli
M Ataman, S Andreozzi, KC Soh, L Miskovic
ICSB 2013, 2013
2013
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Articles 1–20