Identification of the Zn2+ binding site and mode of operation of a mammalian Zn2+ transporter E Ohana, E Hoch, C Keasar, T Kambe, O Yifrach, M Hershfinkel, I Sekler Journal of Biological Chemistry 284 (26), 17677-17686, 2009 | 225 | 2009 |
MOIL: A program for simulations of macromolecules R Elber, A Roitberg, C Simmerling, R Goldstein, H Li, G Verkhivker, ... Computer Physics Communications 91 (1-3), 159-189, 1995 | 209 | 1995 |
A novel approach to decoy set generation: designing a physical energy function having local minima with native structure characteristics C Keasar, M Levitt Journal of molecular biology 329 (1), 159-174, 2003 | 109 | 2003 |
Identification of a colonial chordate histocompatibility gene A Voskoboynik, AM Newman, DM Corey, D Sahoo, D Pushkarev, NF Neff, ... Science 341 (6144), 384-387, 2013 | 92 | 2013 |
Knowledge-based potential for positioning membrane-associated structures and assessing residue-specific energetic contributions CA Schramm, BT Hannigan, JE Donald, C Keasar, JG Saven, ... Structure 20 (5), 924-935, 2012 | 79 | 2012 |
WeFold: a coopetition for protein structure prediction GA Khoury, A Liwo, F Khatib, H Zhou, G Chopra, J Bacardit, LO Bortot, ... Proteins: Structure, Function, and Bioinformatics 82 (9), 1850-1868, 2014 | 75 | 2014 |
RNA binding activity of the ribulose-1, 5-bisphosphate carboxylase/oxygenase large subunit from Chlamydomonas reinhardtii I Yosef, V Irihimovitch, JA Knopf, I Cohen, I Orr-Dahan, E Nahum, ... Journal of Biological Chemistry 279 (11), 10148-10156, 2004 | 71 | 2004 |
Cap-binding activity of an eIF4E homolog from Leishmania Y Yoffe, J Zuberek, M Lewdorowicz, Z Zeira, C Keasar, I Orr-Dahan, ... Rna 10 (11), 1764-1775, 2004 | 67 | 2004 |
Differentiable, multi‐dimensional, knowledge‐based energy terms for torsion angle probabilities and propensities EAD Amir, N Kalisman, C Keasar Proteins: Structure, Function, and Bioinformatics 72 (1), 62-73, 2008 | 47 | 2008 |
MESHI: a new library of Java classes for molecular modeling N Kalisman, A Levi, T Maximova, D Reshef, S Zafriri-Lynn, Y Gleyzer, ... Bioinformatics 21 (20), 3931-3932, 2005 | 47 | 2005 |
Purely structural protein scoring functions using support vector machine and ensemble learning S Mirzaei, T Sidi, C Keasar, S Crivelli IEEE/ACM transactions on computational biology and bioinformatics 16 (5 …, 2016 | 46 | 2016 |
Unraveling the hidden role of a uORF-encoded peptide as a kinase inhibitor of PKCs DR Jayaram, S Frost, C Argov, VB Liju, NP Anto, A Muraleedharan, ... Proceedings of the National Academy of Sciences 118 (40), e2018899118, 2021 | 44 | 2021 |
Hierarchical self-organization of cytoskeletal active networks D Gordon, A Bernheim-Groswasser, C Keasar, O Farago Physical biology 9 (2), 026005, 2012 | 43 | 2012 |
Enhancement of beta-sheet assembly by cooperative hydrogen bonds potential A Levy-Moonshine, ED Amir, C Keasar Bioinformatics 25 (20), 2639-2645, 2009 | 41 | 2009 |
Methods for estimation of model accuracy in CASP12 A Elofsson, K Joo, C Keasar, J Lee, AHA Maghrabi, B Manavalan, ... Proteins: Structure, Function, and Bioinformatics 86, 361-373, 2018 | 34 | 2018 |
High quality prediction of protein q8 secondary structure by diverse neural network architectures I Drori, I Dwivedi, P Shrestha, J Wan, Y Wang, Y He, A Mazza, ... arXiv preprint arXiv:1811.07143, 2018 | 32 | 2018 |
High throughput data acquisition and deep learning for insect ecoinformatics A Gerovichev, A Sadeh, V Winter, A Bar-Massada, T Keasar, C Keasar Frontiers in ecology and evolution 9, 600931, 2021 | 29 | 2021 |
An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12 C Keasar, LJ McGuffin, B Wallner, G Chopra, B Adhikari, D Bhattacharya, ... Scientific reports 8 (1), 9939, 2018 | 24 | 2018 |
Homology as a tool in optimization problems: structure determination of 2D heteropolymers C Keasar, R Elber The Journal of Physical Chemistry 99 (29), 11550-11556, 1995 | 19 | 1995 |
A novel algorithm for non-bonded-list updating in molecular simulations T Maximova, C Keasar Journal of Computational Biology 13 (5), 1041-1048, 2006 | 18 | 2006 |