Ling-Yun Wu
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iSNO-PseAAC: predict cysteine S-nitrosylation sites in proteins by incorporating position specific amino acid propensity into pseudo amino acid composition
Y Xu, J Ding, LY Wu, KC Chou
PloS one 8 (2), e55844, 2013
Structure and dynamics of core/periphery networks
P Csermely, A London, LY Wu, B Uzzi
Journal of Complex Networks 1 (2), 93-123, 2013
iSNO-AAPair: incorporating amino acid pairwise coupling into PseAAC for predicting cysteine S-nitrosylation sites in proteins
Y Xu, XJ Shao, LY Wu, NY Deng, KC Chou
PeerJ 1, e171, 2013
iNitro-Tyr: Prediction of nitrotyrosine sites in proteins with general pseudo amino acid composition
Y Xu, X Wen, LS Wen, LY Wu, NY Deng, KC Chou
PloS one 9 (8), e105018, 2014
Semi-supervised drug-protein interaction prediction from heterogeneous biological spaces
Z Xia, LY Wu, X Zhou, STC Wong
BMC systems biology 4 (S2), S6, 2010
Haplotype reconstruction from SNP fragments by minimum error correction
RS Wang, LY Wu, ZP Li, XS Zhang
Bioinformatics 21 (10), 2456-2462, 2005
Capacitated facility location problem with general setup cost
LY Wu, XS Zhang, JL Zhang
Computers & Operations Research 33 (5), 1226-1241, 2006
Prediction of protein–RNA binding sites by a random forest method with combined features
ZP Liu, LY Wu, Y Wang, XS Zhang, L Chen
Bioinformatics 26 (13), 1616-1622, 2010
Efficient methods for identifying mutated driver pathways in cancer
J Zhao, S Zhang, LY Wu, XS Zhang
Bioinformatics 28 (22), 2940-2947, 2012
NOA: a novel Network Ontology Analysis method
J Wang, Q Huang, ZP Liu, Y Wang, LY Wu, L Chen, XS Zhang
Nucleic acids research 39 (13), e87-e87, 2011
Prediction of palmitoylation sites using the composition of k-spaced amino acid pairs
XB Wang, LY Wu, YC Wang, NY Deng
Protein Engineering, Design & Selection 22 (11), 707-712, 2009
Predicting DNA-and RNA-binding proteins from sequences with kernel methods
X Shao, Y Tian, L Wu, Y Wang, L Jing, N Deng
Journal of Theoretical Biology 258 (2), 289-293, 2009
Models and algorithms for haplotyping problem
XS Zhang, RS Wang, LY Wu, L Chen
Current Bioinformatics 1 (1), 105-114, 2006
Haplotype assembly from aligned weighted SNP fragments
YY Zhao, LY Wu, JH Zhang, RS Wang, XS Zhang
Computational Biology and Chemistry 29 (4), 281-287, 2005
Cancer stem cells display extremely large evolvability: alternating plastic and rigid networks as a potential mechanism: network models, novel therapeutic target strategies …
P Csermely, J Hódsági, T Korcsmáros, D Módos, ÁR Perez-Lopez, ...
Seminars in cancer biology 30, 42-51, 2015
Discovery of co-occurring driver pathways in cancer
J Zhang, LY Wu, XS Zhang, S Zhang
BMC bioinformatics 15 (1), 271, 2014
Inferring protein interactions from experimental data by association probabilistic method
L Chen, LY Wu, Y Wang, XS Zhang
Proteins: Structure, Function, and Bioinformatics 62 (4), 833-837, 2006
Lysine acetylation sites prediction using an ensemble of support vector machine classifiers
Y Xu, XB Wang, J Ding, LY Wu, NY Deng
Journal of Theoretical Biology 264 (1), 130-135, 2010
Analysis on multi-domain cooperation for predicting protein-protein interactions
RS Wang, Y Wang, LY Wu, XS Zhang, L Chen
BMC bioinformatics 8 (1), 391, 2007
Potts model based on a Markov process computation solves the community structure problem effectively
HJ Li, Y Wang, LY Wu, J Zhang, XS Zhang
Physical Review E 86 (1), 016109, 2012
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