Cesim Erten

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Stephen KobourovProfessor of Computer Science, Technical University MunichVerified email at tum.de
Alon EfratAssociate Professor of Computer Science, University of ArizonaVerified email at arizona.edu
Joseph S. B. MitchellDistinguished Professor, Applied Mathematics and Computer Science, Stony Brook UniversityVerified email at stonybrook.edu
Hilal KazanProfessor at Antalya Bilim UniversityVerified email at antalya.edu.tr
Christian A. DuncanProfessor of Computer Science, Quinnipiac UniversityVerified email at acm.org
Melih SözdinlerEmlakjet R&D CenterVerified email at boun.edu.tr
Ferhat AlkanPostdoc in the Netherlands Cancer InstituteVerified email at nki.nl
Ahmet Emre AladağBoğaziçi UniversityVerified email at boun.edu.tr
Anna LubiwProfessor, David R. Cheriton School of Computer Science, University of WaterlooVerified email at uwaterloo.ca
Peter BrassProfessor of Computer Science, City College of New YorkVerified email at cs.ccny.cuny.edu
Dan IsmailescuHofstra UniversityVerified email at hofstra.edu
Rafsan AhmedDoctoral Researcher, Lund UniversityVerified email at med.lu.se
Michael KaufmannProfessor of Computer Science, Tübingen UniversityVerified email at uni-tuebingen.de
Ilyes BaaliPhD student, Weill Cornell Medicine and Memorial Sloan KetteringVerified email at med.cornell.edu
Fabrizio FratiFull Professor, Roma Tre UniversityVerified email at dia.uniroma3.it
Giuseppe LiottaProfessor of Computer Science, University of PerugiaVerified email at unipg.it
Ulrik BrandesETH Zürich, Social Networks LabVerified email at ethz.ch
Seok-Hee HongProfessor of Computer Science, University of SydneyVerified email at sydney.edu.au
Joe FowlerPostdoctoral Research AssociateVerified email at email.arizona.edu
Petra MutzelProfessorin für Informatik, Universität BonnVerified email at cs.uni-bonn.de

Cesim Erten

Computer Science, University of Arizona

Verified email at cs.arizona.edu

Bioinformatics networks Graph algorithms


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GraphAEL: Graph animations with evolving layouts C Erten, PJ Harding, SG Kobourov, K Wampler, G Yee Graph Drawing: 11th International Symposium, GD 2003 Perugia, Italy …, 2004	213	2004
On simultaneous planar graph embeddings P Brass, E Cenek, CA Duncan, A Efrat, C Erten, DP Ismailescu, ... Computational Geometry 36 (2), 117-130, 2007	173*	2007
SPINAL: scalable protein interaction network alignment AE Aladağ, C Erten Bioinformatics 29 (7), 917-924, 2013	172	2013
Exploring the computing literature using temporal graph visualization C Erten, PJ Harding, SG Kobourov, K Wampler, G Yee Visualization and Data Analysis 2004 5295, 45-56, 2004	130	2004
Simultaneous graph drawing: Layout algorithms and visualization schemes C Erten, SG Kobourov, V Le, A Navabi International symposium on graph drawing, 437-449, 2003	115	2003
Simultaneous embedding of planar graphs with few bends C Erten, SG Kobourov International Symposium on Graph Drawing, 195-205, 2004	112	2004
BEAMS: backbone extraction and merge strategy for the global many-to-many alignment of multiple PPI networks F Alkan, C Erten Bioinformatics 30 (4), 531-539, 2014	94	2014
Force-directed approaches to sensor localization A Efrat, D Forrester, A Iyer, SG Kobourov, C Erten, O Kilic ACM Transactions on Sensor Networks (TOSN) 7 (3), 1-25, 2010	56	2010
Intersection-free morphing of planar graphs C Erten, SG Kobourov, C Pitta Graph Drawing: 11th International Symposium, GD 2003 Perugia, Italy …, 2004	35	2004
MEXCOwalk: mutual exclusion and coverage based random walk to identify cancer modules R Ahmed, I Baali, C Erten, E Hoxha, H Kazan Bioinformatics 36 (3), 872-879, 2020	30	2020
CAMPways: constrained alignment framework for the comparative analysis of a pair of metabolic pathways G Abaka, T Bıyıkoğlu, C Erten Bioinformatics 29 (13), i145-i153, 2013	30	2013
Simultaneous embedding of a planar graph and its dual on the grid C Erten, SG Kobourov Theory of Computing Systems 38 (3), 313-327, 2005	28	2005
Crossing minimization in weighted bipartite graphs OA Çakıroḡlu, C Erten, Ö Karataş, M Sözdinler Journal of Discrete Algorithms 7 (4), 439-452, 2009	22	2009
Fixed-location circular arc drawing of planar graphs A Efrat, C Erten, S Kobourov Journal of Graph Algorithms and Applications 11 (1), 145-164, 2007	21	2007
GSPIM: graphical visualization tool for MIPS assembly programming and simulation P Borunda, C Brewer, C Erten ACM SIGCSE Bulletin 38 (1), 244-248, 2006	20	2006
Graph-theoretical comparison of normal and tumor networks in identifying BRCA genes J Dopazo, C Erten BMC systems biology 11, 1-17, 2017	17	2017
SiPAN: simultaneous prediction and alignment of protein–protein interaction networks F Alkan, C Erten Bioinformatics 31 (14), 2356-2363, 2015	17	2015
Colored simultaneous geometric embeddings and universal pointsets U Brandes, C Erten, A Estrella-Balderrama, JJ Fowler, F Frati, M Geyer, ... Algorithmica 60, 569-592, 2011	16	2011
Colored simultaneous geometric embeddings U Brandes, C Erten, J Fowler, F Frati, M Geyer, C Gutwenger, S Hong, ... Computing and Combinatorics: 13th Annual International Conference, COCOON …, 2007	15	2007
RedNemo: topology-based PPI network reconstruction via repeated diffusion with neighborhood modifications F Alkan, C Erten Bioinformatics 33 (4), 537-544, 2017	12	2017

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