Dr. Rune Linding

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Adrian PasculescuComputational Biology and Software Engineering, Lunenfeld Tanenbaum Research Institute, TorontoVerified email at lunenfeld.ca
Toby GibsonEMBLVerified email at embl.de
Peer BorkEMBLVerified email at embl.de
Rob RussellDirector of BioQuant, Professor of Protein Evolution, Heidelberg University, GermanyVerified email at bioquant.uni-heidelberg.de
Karen ColwillStaff Scientist, Lunenfeld-Tanenbaum Research Inst; Manager, Network Biology Collaborative CentreVerified email at lunenfeld.ca
Pau CreixellKoch Institute for Integrative Cancer Research at MITVerified email at mit.edu
Lars Juhl JensenUniversity of CopenhagenVerified email at cpr.ku.dk
Chris Soon Heng TanDepartment of Chemistry, Southern University of Science and TechnologyVerified email at sustech.edu.cn
Marcel van VugtProfessor of Molecular Oncology, University of Groningen, University Medical CentreVerified email at umcg.nl
Gerard OstheimerScience Advisor, U.S. Department of AgricultureVerified email at fas.usda.gov
Jin G ParkArizona State UniversityVerified email at asu.edu
Xavier RobinScientific Software Developer at SIB Swiss Institute of Bioinformatics, University of BaselVerified email at unibas.ch
Gary BaderProfessor of Molecular Genetics and Computer Science, The Donnelly Centre, University of TorontoVerified email at utoronto.ca
Thomas R. CoxGarvan Institute of Medical ResearchVerified email at garvan.org.au
Jesper Ferkinghoff-BorgAssociate Professor, Principal Scientist, Novo Nordisk A/SVerified email at novonordisk.com
Gianni CesareniUniversity of Rome Tor VergataVerified email at uniroma2.it
Leona D. SamsonProfessor Emerita, Biological Engineering, Biology MITVerified email at mit.edu
Thomas Sicheritz-PontenProfessor in Computational Phage Biodiscovery, University of CopenhagenVerified email at sund.ku.dk
Nikolaj Sorgenfrei BlomSenior Researcher, DTUVerified email at kt.dtu.dk
Jeff WranaSenior Investigator, Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto; Professor, Dept. of Mol. Gen., U. ofVerified email at lunenfeld.ca

Dr. Rune Linding

Humboldt-Universität zu Berlin

Verified email at hu-berlin.de - Homepage

Kinome Biology Cancer Network Biology Cell Signaling Signal Transduction


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Protein disorder prediction: implications for structural proteomics R Linding, LJ Jensen, F Diella, P Bork, TJ Gibson, RB Russell Structure 11 (11), 1453-1459, 2003	1311	2003
GlobPlot: exploring protein sequences for globularity and disorder R Linding, RB Russell, V Neduva, TJ Gibson Nucleic acids research 31 (13), 3701-3708, 2003	1073	2003
Systematic discovery of in vivo phosphorylation networks R Linding, LJ Jensen, GJ Ostheimer, MATM van Vugt, C Jørgensen, ... Cell 129 (7), 1415-1426, 2007	770	2007
Dynamic modularity in protein interaction networks predicts breast cancer outcome IW Taylor, R Linding, D Warde-Farley, Y Liu, C Pesquita, D Faria, S Bull, ... Nature biotechnology 27 (2), 199-204, 2009	758	2009
ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins P Puntervoll, R Linding, C Gemund, S Chabanis-Davidson, M Mattingsdal, ... Nucleic acids research 31 (13), 3625-3630, 2003	713	2003
Linear motif atlas for phosphorylation-dependent signaling ML Miller, LJ Jensen, F Diella, C Jørgensen, M Tinti, L Li, M Hsiung, ... Science signaling 1 (35), ra2-ra2, 2008	434	2008
Phospho. ELM: a database of experimentally verified phosphorylation sites in eukaryotic proteins F Diella, S Cameron, C Gemünd, R Linding, A Via, B Kuster, ... BMC bioinformatics 5 (1), 1-5, 2004	402	2004
The hypoxic cancer secretome induces pre-metastatic bone lesions through lysyl oxidase TR Cox, RMH Rumney, EM Schoof, L Perryman, AM Høye, A Agrawal, ... Nature 522 (7554), 106-110, 2015	392	2015
A comparative study of the relationship between protein structure and β-aggregation in globular and intrinsically disordered proteins R Linding, J Schymkowitz, F Rousseau, F Diella, L Serrano Journal of molecular biology 342 (1), 345-353, 2004	369	2004
Phosphorylation dynamics during early differentiation of human embryonic stem cells D Van Hoof, J Muñoz, SR Braam, MWH Pinkse, R Linding, AJR Heck, ... Cell stem cell 5 (2), 214-226, 2009	352	2009
Systematic discovery of new recognition peptides mediating protein interaction networks V Neduva, R Linding, I Su-Angrand, A Stark, F De Masi, TJ Gibson, ... PLoS Biol 3 (12), e405, 2005	329	2005
NetworKIN: a resource for exploring cellular phosphorylation networks R Linding, LJ Jensen, A Pasculescu, M Olhovsky, K Colwill, P Bork, ... Nucleic acids research 36 (suppl_1), D695-D699, 2007	299	2007
Pathway and network analysis of cancer genomes P Creixell, J Reimand, S Haider, G Wu, T Shibata, M Vazquez, ... Nature methods 12 (7), 615, 2015	282	2015
ELM: the status of the 2010 eukaryotic linear motif resource CM Gould, F Diella, A Via, P Puntervoll, C Gemünd, ... Nucleic acids research 38 (suppl_1), D167-D180, 2010	279	2010
WW domains provide a platform for the assembly of multiprotein networks RJ Ingham, K Colwill, C Howard, S Dettwiler, CSH Lim, J Yu, K Hersi, ... Molecular and cellular biology 25 (16), 7092-7106, 2005	240	2005
KinomeXplorer: an integrated platform for kinome biology studies H Horn, EM Schoof, J Kim, X Robin, ML Miller, F Diella, A Palma, ... Nature methods 11 (6), 603-604, 2014	224	2014
Cell-specific information processing in segregating populations of Eph receptor ephrin–expressing cells C Jørgensen, A Sherman, GI Chen, A Pasculescu, A Poliakov, M Hsiung, ... Science 326 (5959), 1502-1509, 2009	224	2009
A mitotic phosphorylation feedback network connects Cdk1, Plk1, 53BP1, and Chk2 to inactivate the G 2/M DNA damage checkpoint MATM van Vugt, AK Gardino, R Linding, GJ Ostheimer, HC Reinhardt, ... PLoS Biol 8 (1), e1000287, 2010	222	2010
DNA damage activates a spatially distinct late cytoplasmic cell-cycle checkpoint network controlled by MK2-mediated RNA stabilization HC Reinhardt, P Hasskamp, I Schmedding, S Morandell, MATM van Vugt, ... Molecular cell 40 (1), 34-49, 2010	208	2010
Comparative analysis reveals conserved protein phosphorylation networks implicated in multiple diseases CSH Tan, B Bodenmiller, A Pasculescu, M Jovanovic, MO Hengartner, ... Science signaling 2 (81), ra39-ra39, 2009	192	2009

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