| TEtools facilitates big data expression analysis of transposable elements and reveals an antagonism between their activity and that of piRNA genes E Lerat, M Fablet, L Modolo, H Lopez-Maestre, C Vieira Nucleic acids research 45 (4), e17-e17, 2016 | 109 | 2016 |
| SNP calling from RNA-seq data without a reference genome: identification, quantification, differential analysis and impact on the protein sequence H Lopez-Maestre, L Brinza, C Marchet, J Kielbassa, S Bastien, ... Nucleic Acids Research 44 (19), e148-e148, 2016 | 94 | 2016 |
| Identification of misexpressed genetic elements in hybrids between Drosophila-related species H Lopez-Maestre, EAG Carnelossi, V Lacroix, N Burlet, B Mugat, ... Scientific Reports 7, 2017 | 38 | 2017 |
| Transposable Element Misregulation Is Linked to the Divergence between Parental piRNA Pathways in Drosophila Hybrids V Romero-Soriano, L Modolo, H Lopez-Maestre, B Mugat, E Pessia, ... Genome biology and evolution 9 (6), 1450-1470, 2017 | 34 | 2017 |
| Playing hide and seek with repeats in local and global de novo transcriptome assembly of short RNA-seq reads L Lima, B Sinaimeri, G Sacomoto, H Lopez-Maestre, C Marchet, V Miele, ... Algorithms for molecular biology 12 (1), 1-19, 2017 | 23 | 2017 |
| Rapid protection induced by a single-shot Lassa vaccine in male cynomolgus monkeys M Mateo, S Reynard, N Pietrosemoli, E Perthame, A Journeaux, K Noy, ... Nature Communications 14 (1), 1352, 2023 | 6 | 2023 |
| Throughout in vitro first spermatogenic wave: Next-generation sequencing gene expression patterns of fresh and cryopreserved prepubertal mice testicular tissue explants L Dumont, H Lopez Maestre, F Chalmel, L Huber, A Rives-Feraille, ... Frontiers in Endocrinology 14, 1112834, 2023 | 3 | 2023 |
| Analyses et méthodes pour les données transcriptomiques issues d’espèces non modèles: Variation de l’expression des éléments transposables (et des gènes) et variants nucléotidiques H Lopez-Maestre Université Claude Bernard Lyon 1, 2017 | 2 | 2017 |
| Atypical landscape of transposable elements in the large genome of Aedes aegypti J Daron, A Bergman, H Lopez-Maestre, L Lambrechts bioRxiv, 2024.02. 07.579293, 2024 | 1 | 2024 |
| IL-23 Signaling Induces Autoimmune Disease Genes in Mucosal-Associated Invariant T Cells T Stephen, A Dangien, C Leloup, I Mezghiche, L Camard, ... ARTHRITIS & RHEUMATOLOGY 74, 3437-3438, 2022 | 1 | 2022 |
| Les cellules MAIT (Mucosal-associated invariant T) sont impliquées dans la physiopathologie du psoriasis T Stephen, A Dangien, C Leloup, I Mezghiche, L Camard, ... Annales de Dermatologie et de Vénéréologie-FMC 2 (8), A111, 2022 | | 2022 |
