| Amplicon sequencing provides more accurate microbiome information in healthy children compared to culturing S Gupta, MS Mortensen, S Schjørring, U Trivedi, G Vestergaard, ... Communications biology 2 (1), 291, 2019 | 121 | 2019 |
| Metagenomic profiling of soil microbes to mine salt stress tolerance genes V Ahmed, MK Verma, S Gupta, V Mandhan, NS Chauhan Frontiers in Microbiology 9, 319493, 2018 | 80 | 2018 |
| The infant gut resistome associates with E. coli, environmental exposures, gut microbiome maturity, and asthma-associated bacterial composition X Li, J Stokholm, A Brejnrod, GA Vestergaard, J Russel, U Trivedi, ... Cell host & microbe 29 (6), 975-987. e4, 2021 | 78 | 2021 |
| Metagenomic evidence for co-occurrence of antibiotic, biocide and metal resistance genes in pigs X Li, C Rensing, G Vestergaard, M Arumugam, J Nesme, S Gupta, ... Environment International 158, 106899, 2022 | 56 | 2022 |
| An improved methodology to overcome key issues in human fecal metagenomic DNA extraction J Kumar, M Kumar, S Gupta, V Ahmed, M Bhambi, R Pandey, ... Genomics, Proteomics and Bioinformatics 14 (6), 371-378, 2016 | 45 | 2016 |
| Western Indian rural gut microbial diversity in extreme Prakriti endo-phenotypes reveals signature microbes NS Chauhan, R Pandey, AK Mondal, S Gupta, MK Verma, S Jain, ... Frontiers in microbiology 9, 287716, 2018 | 43 | 2018 |
| Environmental shaping of the bacterial and fungal community in infant bed dust and correlations with the airway microbiota S Gupta, MH Hjelmsø, J Lehtimäki, X Li, MS Mortensen, J Russel, ... Microbiome 8, 1-16, 2020 | 41 | 2020 |
| Systemic analysis of soil microbiome deciphers anthropogenic influence on soil ecology and ecosystem functioning S Gupta, M Kumar, J Kumar, V Ahmad, R Pandey, NS Chauhan International Journal of Environmental Science and Technology 14, 2229-2238, 2017 | 28 | 2017 |
| The developing airway and gut microbiota in early life is influenced by age of older siblings ED Christensen, MH Hjelmsø, J Thorsen, S Shah, T Redgwell, ... Microbiome 10 (1), 106, 2022 | 25 | 2022 |
| Comparative analysis of the alveolar microbiome in COPD, ECOPD, Sarcoidosis, and ILD patients to identify respiratory illnesses specific microbial signatures S Gupta, M Shariff, G Chaturvedi, A Sharma, N Goel, M Yadav, ... Scientific Reports 11 (1), 3963, 2021 | 25 | 2021 |
| Comparative Genomics of Host–Symbiont and Free-Living Oceanobacillus Species A Kumar Mondal, J Kumar, R Pandey, S Gupta, M Kumar, G Bansal, ... Genome Biology and Evolution 9 (5), 1175-1182, 2017 | 20 | 2017 |
| Functional metagenomics identifies novel genes ABCTPP, TMSRP1 and TLSRP1 among human gut enterotypes MK Verma, V Ahmed, S Gupta, J Kumar, R Pandey, V Mandhan, ... ScIentIfIc REPoRtS 8 (1), 1397, 2018 | 14 | 2018 |
| Do environmental pharmaceuticals affect the composition of bacterial communities in a freshwater stream? A case study of the Knivsta river in the south of Sweden A Hagberg, S Gupta, O Rzhepishevska, J Fick, M Burmølle, M Ramstedt Science of The Total Environment 763, 142991, 2021 | 13 | 2021 |
| S9A serine protease engender antigenic gluten catabolic competence to the human gut microbe J Kumar, MK Verma, T Kumar, S Gupta, R Pandey, M Yadav, ... Indian journal of microbiology 58, 294-300, 2018 | 7 | 2018 |
| Computational sequence analysis and structure prediction of jack bean urease S Gupta, A Kathait, V Sharma Int J 3, 185-91, 2015 | 6 | 2015 |
| Fungi and bacteria in the beds of rural and urban infants correlate with later risk of atopic diseases J Lehtimäki, S Gupta, M Hjelmsø, S Shah, J Thorsen, MA Rasmussen, ... Clinical & Experimental Allergy 53 (12), 1268-1278, 2023 | 2 | 2023 |
| The infant gut resistome is shaped by environmental exposures, and associates with gut bacterial maturity and asthma-associated bacterial composition X Li, J Stokholm, A Brejnrod, G Alberg Vestergaard, J Russel, U Trivedi, ... Available at SSRN 3762767, 2021 | 2 | 2021 |
| The need for high-resolution gut microbiome characterization to design efficient strategies for sustainable aquaculture production S Gupta, AVP de León, M Kodama, M Hötzinger, CG Clausen, L Pless, ... bioRxiv, 2024 | | 2024 |
| The Salmon Microbial Genome Atlas enables novel insights into bacteria-host interactions via functional mapping AVP de Leon, M Hoetzinger, T Hensen, S Gupta, B Weston, SM Johnsen, ... bioRxiv, 2023.12. 10.570985, 2023 | | 2023 |
| Pharmaceuticals and biofilms in a fresh-water stream in the south of Sweden A Hagberg, S Gupta, O Rzhepishevska, J Fick, M Burmølle, M Ramstedt biofilms9, 2020 | | 2020 |
Søren J. SørensenUniversity of CopenhagenVerified email at bio.ku.dk
