Manimozhiyan Arumugam

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	All	Since 2016
Citations	30912	20569
h-index	36	32
i10-index	40	35

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200420052006200720082009201020112012201320142015201620172018201920202021146 264 244 248 217 194 363 842 1318 1673 1973 2450 2896 3184 3420 4328 6482 230

Co-authors

Peer BorkEMBLVerified email at embl.de
Daniel R. MendeAsst. Professor, Amsterdam University Medical Center, University of AmsterdamVerified email at amsterdamumc.nl
Shinichi SunagawaETH Zürich; Swiss Institute of BioinformaticsVerified email at ethz.ch
Jens Roat KultimaDanish Competition and Consumer Agency; Bioinformatics and Economic Fraud SpecialistVerified email at kfst.dk
Jeroen RaesProfessor, Faculty of Medicine, Rega Institute, KU Leuven; Group Leader Microbiome, VIB, BelgiumVerified email at med.kuleuven.be
Oluf PedersenProfessor of Metabolic Genetics, University of CopenhagenVerified email at sund.ku.dk
Julien TapDanone ResearchVerified email at danone.com
Torben HansenProfessor of Metabolic Genetics, University of Copenhagen, DenmarkVerified email at sund.ku.dk
Michael BrentWashington UniversityVerified email at wustl.edu
Alison S. WallerBrock UniversityVerified email at brocku.ca
Vera van Noortprofessor, KULeuvenVerified email at biw.kuleuven.be
Henrik Bjørn NielsenClinical-Microbiomics A/SVerified email at clinical-microbiomics.com
Takuji YamadaAssociate Professor, Tokyo Institute of TechnologyVerified email at bio.titech.ac.jp
Willem M de VosProfessor @ Microbiology Wageningen Netherlands @Helsinki FinlandVerified email at wur.nl
George WeinstockDirector of Microbial Genomics, Professor, Jackson LaboratoryVerified email at jax.org
Karthik KotaVerified email at gatech.edu
Shamil SunyaevProfessor of Biomedical Informatics and of Medicine (BWH), Harvard Medical SchoolVerified email at rics.bwh.harvard.edu
Makedonka MitrevaProfessor of Medicine, Washington University School of MedicineVerified email at wustl.edu
Luis Pedro CoelhoISTBI, Fudan UniversityVerified email at fudan.edu.cn
Nassos TypasGroup Leader, EMBLVerified email at embl.de

Manimozhiyan Arumugam

Associate Professor, Faculty of Health and Medical Sciences, University of Copenhagen

Verified email at sund.ku.dk - Homepage

Computational Genomics Metagenomics Human Gut Microbiome


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A human gut microbial gene catalogue established by metagenomic sequencing J Qin, R Li, J Raes, M Arumugam, KS Burgdorf, C Manichanh, T Nielsen, ... nature 464 (7285), 59-65, 2010	8692	2010
Enterotypes of the human gut microbiome M Arumugam, J Raes, E Pelletier, D Le Paslier, T Yamada, DR Mende, ... Nature 473 (7346), 174-180, 2011	5367	2011
Richness of human gut microbiome correlates with metabolic markers E Le Chatelier, T Nielsen, J Qin, E Prifti, F Hildebrand, G Falony, ... Nature 500 (7464), 541-546, 2013	2762	2013
Genome sequence of the Brown Norway rat yields insights into mammalian evolution RA Gibbs, L Pachter Nature 428 (6982), 493-521, 2004	2185	2004
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019	1474	2019
An integrated catalog of reference genes in the human gut microbiome J Li, H Jia, X Cai, H Zhong, Q Feng, S Sunagawa, M Arumugam, ... Nature biotechnology 32 (8), 834-841, 2014	1102	2014
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota K Forslund, F Hildebrand, T Nielsen, G Falony, E Le Chatelier, ... Nature 528 (7581), 262-266, 2015	1034	2015
Human gut microbes impact host serum metabolome and insulin sensitivity HK Pedersen, V Gudmundsdottir, HB Nielsen, T Hyotylainen, T Nielsen, ... Nature 535 (7612), 376-381, 2016	797	2016
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ... Nature biotechnology 32 (8), 822-828, 2014	628	2014
Genomic variation landscape of the human gut microbiome S Schloissnig, M Arumugam, S Sunagawa, M Mitreva, J Tap, A Zhu, ... Nature 493 (7430), 45-50, 2013	618	2013
Gut microbiome development along the colorectal adenoma–carcinoma sequence Q Feng, S Liang, H Jia, A Stadlmayr, L Tang, Z Lan, D Zhang, H Xia, X Xu, ... Nature communications 6, 6528, 2015	501	2015
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ... PeerJ Preprints 6, e27295v2, 2018	481	2018
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications P Yilmaz, R Kottmann, D Field, R Knight, JR Cole, L Amaral-Zettler, ... Nature biotechnology 29 (5), 415-420, 2011	479	2011
Transcriptome complexity in a genome-reduced bacterium M Güell, V Van Noort, E Yus, WH Chen, J Leigh-Bell, K Michalodimitrakis, ... Science 326 (5957), 1268-1271, 2009	460	2009
The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates EG Zoetendal, J Raes, B Van Den Bogert, M Arumugam, CCGM Booijink, ... The ISME journal 6 (7), 1415-1426, 2012	441	2012
Metagenomic analysis of faecal microbiome as a tool towards targeted non-invasive biomarkers for colorectal cancer J Yu, Q Feng, SH Wong, D Zhang, Q yi Liang, Y Qin, L Tang, H Zhao, ... Gut 66 (1), 70-78, 2017	372	2017
Metagenomic species profiling using universal phylogenetic marker genes S Sunagawa, DR Mende, G Zeller, F Izquierdo-Carrasco, SA Berger, ... Nature methods 10 (12), 1196-1199, 2013	344	2013
Enterotypes in the landscape of gut microbial community composition PI Costea, F Hildebrand, M Arumugam, F Bäckhed, MJ Blaser, ... Nature microbiology 3 (1), 8-16, 2018	323	2018
Country-specific antibiotic use practices impact the human gut resistome K Forslund, S Sunagawa, JR Kultima, DR Mende, M Arumugam, A Typas, ... Genome research 23 (7), 1163-1169, 2013	317	2013
A catalog of the mouse gut metagenome L Xiao, Q Feng, S Liang, SB Sonne, Z Xia, X Qiu, X Li, H Long, J Zhang, ... Nature biotechnology 33 (10), 1103-1108, 2015	285	2015

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