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Georgios Fengos
Georgios Fengos
Post-Doc at EPFL
Verified email at bsse.ethz.ch
Title
Cited by
Cited by
Year
MEMOTE for standardized genome-scale metabolic model testing
C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ...
Nature biotechnology 38 (3), 272-276, 2020
1782020
pyTFA and matTFA: a Python package and a Matlab toolbox for Thermodynamics-based Flux Analysis
P Salvy, G Fengos, M Ataman, T Pathier, KC Soh, V Hatzimanikatis
Bioinformatics 35 (1), 167-169, 2019
602019
redGEM: Systematic reduction and analysis of genome-scale metabolic reconstructions for development of consistent core metabolic models
M Ataman, DF Hernandez Gardiol, G Fengos, V Hatzimanikatis
PLoS computational biology 13 (7), e1005444, 2017
552017
Memote: A community driven effort towards a standardized genome-scale metabolic model test suite
C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ...
BioRxiv, 350991, 2018
532018
Rites of passage: requirements and standards for building kinetic models of metabolic phenotypes
L Miskovic, M Tokic, G Fengos, V Hatzimanikatis
Current opinion in biotechnology 36, 146-153, 2015
412015
Kinetic models of metabolism that consider alternative steady-state solutions of intracellular fluxes and concentrations
T Hameri, G Fengos, M Ataman, L Miskovic, V Hatzimanikatis
Metabolic engineering 52, 29-41, 2019
312019
The plasticity of TGF-βsignaling
G Cellière, G Fengos, M Hervé, D Iber
BMC systems biology 5 (1), 1-13, 2011
282011
Analyzing and constraining signaling networks: parameter estimation for the user
F Geier, G Fengos, F Felizzi, D Iber
Computational modeling of signaling networks, 23-39, 2012
202012
A computational analysis of the dynamic roles of talin, Dok1, and PIPKI for integrin activation
F Geier, G Fengos, D Iber
PLoS One 6 (11), e24808, 2011
172011
Memote: A Community-Driven Effort towards a Standardized Genome-Scale Metabolic Model Test Suite bioRxiv 350991
C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ...
52018
Spatial proteomic and phospho-proteomic organization in three prototypical cell migration modes
G Fengos, A Schmidt, K Martin, E Fluri, R Aebersold, D Iber, O Pertz
Proteome science 12 (1), 1-18, 2014
52014
Predictive models for cellular signaling networks
D Iber, G Fengos
Computational Modeling of Signaling Networks, 1-22, 2012
42012
The effects of model complexity and size on metabolic flux distribution and control. Case study in E. coli
T Hameri, G Fengos, V Hatzimanikatis
bioRxiv, 666859, 2019
32019
Prediction stability in a data-based, mechanistic model of σF regulation during sporulation in Bacillus subtilis
G Fengos, D Iber
Scientific reports 3 (1), 1-10, 2013
32013
Prediction stability in a data-based, mechanistic model of σF regulation during sporulation in Bacillus subtilis
G Fengos, D Iber
Scientific reports 3 (1), 1-10, 2013
32013
Symbolic Kinetic Models in Python (SKiMpy): Intuitive modeling of large-scale biological kinetic models
DR Weilandt, P Salvy, M Masid, G Fengos, R Denhardt-Erikson, ...
bioRxiv, 2022
22022
The effects of model complexity and size on metabolic flux distribution and control: case study in Escherichia coli
T Hameri, G Fengos, V Hatzimanikatis
BMC bioinformatics 22 (1), 1-25, 2021
22021
Analysis and design of metabolic engineering and synthetic biology strategies using large scale dynamic models of metabolism
G Fengos, L Miskovic, V Hatzimanikatis
Metabolic Engineering 11, 2016
12016
The effects of model complexity and size on metabolic flux distribution and control. Case study inE. coli
T Hameri, G Fengos, V Hatzimanikatis
2019
Toward the identification of new cancer therapy targets using metabolic modeling in a human genome scale
M Masid, M Ataman, G Fengos, V Hatzimanikatis
Biochemical and Molecular Engineering XX, 2017
2017
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